Hydra

Pipeline for amplicon sequencing projects. OTUs can be build with various methods (usearch,vsearch,uparse,swarm) and classified using the RDP Classifier and SINA. Final output is a BIOM file for downstream processing (Phyloseq/R)

nioo-knaw / hydra

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Organisatie: Koninklijke Nederlandse Akademie van Wetenschappen
Bijgewerkt: 1 jaar geleden bijgewerkt
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Forks: 1
Issues: 0
Merge requests: 0

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Python [76.8%]

TeX [21.9%]

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